BIGapp

BIGapp is a user-friendly web application built with R and Shiny, designed to simplify the processing of low to mid-density genotyping data for both diploid and polyploid species.

BIGapp provides a powerful and intuitive interface for researchers and breeders to analyze genomic data without requiring command-line expertise.

GitHub

View the BIGapp code repository and learn more about the technical backend of BIGapp.

BIGapp web demo

This web demo allows users to move through all the included features of BIGapp to learn more before they download the code. The demo version works best with either the included demo files (see picture below) or less than 500 marker test datasets.

To use the full version of BIGapp, follow the step-by-step tutorials.

Demo file location within the yellow informational button

Tutorials & Step-by-Step instructions

Step-by-step tutorials on how to run BIGapp, load data, set parameters and more.

In-app Help Section

BIGapp features an extensive in-app help section that walks users through the various tools and analysis available in BIGapp.

Dosage calling view of in-app help pages