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DeltaBreed v1.3

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Frequently Asked Questions

Accessing DeltaBreed

  • How do I get added to a program in DeltaBreed as a user?

    The program’s administrator can add you and give you certain permission levels (program administrator, read only, experimental collaborator). If you are unsure of who the program administrator is for your program, please reach out to us at breeding-insight@ufl.edu. 

  • How do I log in to DeltaBreed?

    Your login is authenticated by your ORCID credentials. Using your ORCID associated email and password, you can log into DeltaBreed after you have been added as a user by Breeding Insight staff. (See Authenticate ORICD for more information.)

About DeltaBreed

  • What is DeltaBreed?

    DeltaBreed is an open source data management system built with a breeder in mind. DeltaBreed was designed for breeding programs working with Breeding Insight and can be used for any species, plant or animal. 

    Through DeltaBreed users can:

    • Curate germplasm including pedigree connections
    • Store and share species ontologies
    • House experiments with observations
    • Enjoy interoperability with Field Book for data collection in real time

Using DeltaBreed

  • Are there materials I can use to learn how to use DeltaBreed?

    Yes! We feature learning materials on our website: https://breedinginsight.org/learning-hub/deltabreed/learning-deltabreed/. These materials feature step-by-step directions, troubleshooting ideas, and best practice techniques to help you learn how to use DeltaBreed.

    If you are an ARS group working with Breeding Insight, you can also contact us a breeding-insight@ufl.edu to schedule a training session.

  • Do I need to upload data in any specific order in DeltaBreed?

    Yes, you must upload germplasm and ontology (trait terms) before you load an experiment. If an experiment upload is attempted before both germplasm and ontology are uploaded, DeltaBreed will throw an error.

  • Does DeltaBreed use any validations to ensure my data upload is correct?

    Yes, DeltaBreed uses a variety of validations and specific error messaging to help users ensure that their upload has been properly vetted and curated.

  • What should I do if I get stuck or have technical issues while using DeltaBreed?

    We are here to help you through any logistical or technical problem you encounter or question you have as you work in DeltaBreed. Please reach out to us at breeding-insight@ufl.edu. 

Release notes and Information

  • What is included in the latest v1.3 DeltaBreed release?

    Nested Observation Units
    You can now define and manage nested observation units, such as plants within plots, or fish within tanks.
    This added flexibility allows for more precise data collection and
    better reflects real-world experimental designs, making it easier to
    capture detailed insights at multiple levels.     

    Improved Performance
    Expect faster response times, improved scalability, and a smoother experience when working with large datasets.  

    Enhanced Integration with BrApps (Including Field Book)
    DeltaBreed v1.3 strengthens interoperability with BrAPI-compatible applications. Enjoy improved interaction with BrApps, including Field Book, enabling more streamlined field data collection. 

    These updates are part of our ongoing commitment to delivering a flexible, performant, and customizable platform for your breeding programs’ needs. 

  • Where can I find release notes for DeltaBreed?

    Please refer to our GitHub page:

    Release notes:
    bi-web:  https://github.com/Breeding-Insight/bi-web/releases
    bi-api:  https://github.com/Breeding-Insight/bi-api/releases